Dougherty, Edward individual record
Distinguished Professor
overview

My research focuses on genomic signal processing and image analysis.

selected publications
Academic Articles380
  • Imani, M., Dougherty, E. R., & Braga-Neto, U. (2020). Boolean Kalman filter and smoother under model uncertainty. Automatica. 111, 108609-108609.
    doi badge
  • Zollanvari, A., & Dougherty, E. R. (2019). Optimal Bayesian Classification With Vector Autoregressive Data Dependency. IEEE Transactions on Signal Processing. 67(12), 3073-3086.
    doi badge
  • Boluki, S., Zamani Dadaneh, S., Qian, X., & Dougherty, E. R. (2019). Optimal clustering with missing values.. BMC Bioinformatics. 20(Suppl 12), 321.
    doi badge pubmed badge
  • Boluki, S., Esfahani, M. S., Qian, X., & Dougherty, E. R. (2019). Constructing Pathway-Based Priors within a Gaussian Mixture Model for Bayesian Regression and Classification.. IEEE/ACM Trans Comput Biol Bioinform. 16(2), 524-537.
    doi badge pubmed badge
  • Karbalayghareh, A., Braga-Neto, U., & Dougherty, E. R. (2019). Classification of Single-Cell Gene Expression Trajectories from Incomplete and Noisy Data.. IEEE/ACM Trans Comput Biol Bioinform. 16(1), 193-207.
    doi badge pubmed badge
Books4
  • Braga-Neto, U. M., & Dougherty, E. R. (2015). Error Estimation for Pattern Recognition. John Wiley & Sons, Inc..
    doi badge
  • Shmulevich, I., & Dougherty, E. R. (2014). Genomic signal processing.
  • Dougherty, E. R., & Bittner, M. L. (2011). Epistemology of the Cell. John Wiley & Sons, Inc..
    doi badge
  • Hirata, R., Brun, M., Barrera, J., & Dougherty, E. R. (2006). Aperture filters: Theory, application, and multiresolution analysis.
Chapters7
  • Hua, J., Sima, C., Cypert, M., Dougherty, E. R., Trent, J. M., & Bittner, M. L. (2017). Dynamical Analysis of Drug Efficacy and Mechanism of Action Using GFP Reporters. Biometrics. 1145-1174. IGI Global.
    doi badge
  • Huang, Y., & Dougherty, E. R. (2008). Probabilistic Boolean Networks as Models for Gene Regulation. Analysis of Microarray Data. 205-242. Wiley-VCH Verlag GmbH & Co. KGaA.
    doi badge
  • Datta, A., Choudhary, A., Bittner, M. L., & Dougherty, E. R. (2007). Modeling and control in cancer genomics. Modeling and Control of Complex Systems. 339-366.
  • Dougherty, E. R., & Attoor, S. N. (2006). Design Issues and Comparison of Methods for Microarray-Based Classification. Computational and Statistical Approaches to Genomics. 119-136. Springer US.
    doi badge
  • Chen, Y., Dougherty, E. R., Bittner, M. L., Meltzer, P., & Trent, J. (2006). Microarray Image Analysis and Gene Expression Ratio Statistics. Computational and Statistical Approaches to Genomics. 1-19. Springer US.
    doi badge
Conference Papers220
  • Dehghannasiri, R., Qian, X., & Dougherty, E. R. (2019). Robust Smoothing for State-Space Models with Unknown Noise Statistics. 2018 52nd Asilomar Conference on Signals, Systems, and Computers, 2018 52nd Asilomar Conference on Signals, Systems, and Computers. 00, 1024-1028.
    doi badge
  • Karbalayghareh, A., Braga-Neto, U., & Dougherty, E. R. (2017). Intrinsically Bayesian Robust Classifier for Single-Cell Gene Expression Time Series in Gene Regulatory Networks. Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics, BCB '17: 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. 766-767.
    doi badge
  • Karbalayghareh, A., Braga-Neto, U., & Dougherty, E. R. (2017). Classification of Gaussian trajectories with missing data in Boolean gene regulatory networks. 2017 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2017 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP). 1078-1082.
    doi badge
  • Dehghannasiri, R., Qian, X., & Dougherty, E. R. (2016). Optimal experimental design in canonical expansions with applications to signal compression. 2016 IEEE Global Conference on Signal and Information Processing (GlobalSIP), 2016 IEEE Global Conference on Signal and Information Processing (GlobalSIP). 94-98.
    doi badge
  • Dalton, L. A., & Dougherty, E. R. (2016). Small-Sample Classification. Springer Series in Materials Science. 225, 77-101.
    doi badge
in the news
patents
Patents2
  • Dougherty, E., Balagurunathan, Y., & Chen, Y. (2008). Simulating microarrays using a parameterized model.
    open access badge
  • Shmulevich, I., Dougherty, E., & Zhang, W. (2007). Probabilistic boolean networks.
    open access badge
chaired theses and dissertations
Email
e-dougherty@tamu.edu
First Name
Edward
Last Name
Dougherty
mailing address
Texas A&M University; Electrical Engineering; 3128 TAMU
College Station, TX 77843-3128
USA