Gibbs, Holly individual record
Associate Research Scientist

We have yet to understand how embryonic brain development gives rise to brain function and how deficits in this process lead to brain disorders. To help improve this understanding, I'm interested in developing accessible microscopy, labeling, visualization, and bioimage informatics tools for creating multi-scale models of the emergence of brain structure and function.

education and training
selected publications
Academic Articles16
  • Sen, D., Classen, A., Fernández, A., Grüner-Nielsen, L., Gibbs, H. C., Esmaeili, S., ... Verhoef, A. J. (2021). Extended focal depth Fourier domain optical coherence microscopy with a Bessel-beam – LP02 mode – from a higher order mode fiber. Biomedical Optics Express. 12(12), 7327-7327.
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  • Gibbs, H. C., Mota, S. M., Hart, N. A., Min, S. W., Vernino, A. O., Pritchard, A. L., ... Perez, L. M. (2021). Navigating the Light-Sheet Image Analysis Software Landscape: Concepts for Driving Cohesion From Data Acquisition to Analysis. Frontiers in Cell and Developmental Biology. 9, 739079.
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  • Kumar, K., Gibbs, H. C., Yeh, A. T., & Griffing, L. R (2021). The Sterol Trafficking Pathway in Arabidopsis thaliana.. Front Plant Sci. 12, 616631.
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  • Kreeger, P. K., Brock, A., Gibbs, H. C., Grande-Allen, K. J., Huang, A. H., Masters, K. S., ... Servoss, S. L (2020). Ten simple rules for women principal investigators during a pandemic.. PLoS Comput Biol. 16(10), e1008370-e1008370.
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  • Massett, M. P., Bywaters, B. C., Gibbs, H. C., Trzeciakowski, J. P., Padgham, S., Chen, J., ... Trache, A (2020). Loss of smooth muscle α-actin effects on mechanosensing and cell-matrix adhesions.. Exp Biol Med (Maywood). 245(4), 374-384.
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Conference Papers4
  • Hart, N. A., Gibbs, H. C., & Yeh, A. T (2020). Compact spectrograph for hyperspectral imaging with overlapping fluorescent reporters. Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing XXVII, Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing XXVII. 11245, 112450l-112450l-10.
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  • Chang-Gonzalez, A. C., Gibbs, H. C., Lekven, A. C., Yeh, A. T., & Hwang, W. (2020). Image-Based Structural Modeling of the Early-Stage Zebrafish Embryo Brain. BIOPHYSICAL JOURNAL. 118(3), 461A-461A.
  • Gibbs, H. C., Dodson, C. R., Bai, Y., Lekven, A. C., & Yeh, A. T (2013). Combined lineage mapping and fate specification profiling with NLOM-OCM using sub-10-fs pulses. Optical Methods in Developmental Biology, SPIE BiOS. 8593, 85930k-85930k-11.
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  • Zhi, M., Gibbs, H. C., & Yeh, A. T (2012). Aberration correction of sub-10-fs pulse focusing with highnumerical-aperture microscope objective. Biomedical Optics, BIOMED 2012.
First Name
Last Name
mailing address
Texas A&M University; Microscopy and Imaging Center; 2257 TAMU
College Station, Texas 77843-2257