overview

Mammalian comparative genomics, phylogeny, biogeography, and molecular evolution, with a specific emphasis on feline evolutionary genomics, including: gene mapping, sex chromosome genetics, speciation and mechanisms of male hybrid sterility.

selected publications
Academic Articles158
  • Murphy, W. J., & Harris, A. J. (2024). Toward telomere-to-telomere cat genomes for precision medicine and conservation biology.. Genome Research. 34(5), 655-664.
    doi badge pubmed badge online source badge
  • Bredemeyer, K. R., vonHoldt, B. M., Foley, N. M., Childers, I., Brzeski, K. E., & Murphy, W. J. (2024). The value of hybrid genomes: Building two highly contiguous reference genome assemblies to advance Canis genomic studies.. Journal of Heredity. esae013.
    doi badge pubmed badge online source badge
  • Foley, N. M., Harris, A. J., Bredemeyer, K. R., Ruedi, M., Puechmaille, S. J., Teeling, E. C., Criscitiello, M. F., & Murphy, W. J. (2024). Karyotypic stasis and swarming influenced the evolution of viral tolerance in a species-rich bat radiation.. 4(2), 100482-100482.
    doi badge pubmed badge online source badge
  • Yuan, J., Kitchener, A. C., Lackey, L. B., Sun, T., Jiangzuo, Q., Tuohetahong, Y., ... Li, G. (2024). The genome of the black-footed cat: Revealing a rich natural history and urgent conservation priorities for small felids.. Proceedings of the National Academy of Sciences of the United States of America. 121(2), e2310763120.
    doi badge pubmed badge online source badge
  • Lescroart, J., Bonilla-Snchez, A., Napolitano, C., Buitrago-Torres, D. L., Ramrez-Chaves, H. E., Pulido-Santacruz, P., ... Eizirik, E. (2023). Extensive Phylogenomic Discordance and the Complex Evolutionary History of the Neotropical Cat Genus Leopardus.. Molecular Biology and Evolution (MBE). 40(12), msad255.
    doi badge pubmed badge online source badge
Chapters8
  • Murphy, W. J. (2016). Evolution, phylogeny, ecology, and conservation of the clade Glires: Lagomorpha and Rodentia. Wilson, D. E., Lacher, T. E., & Mittermeier, R. A. (Eds.), Handbook of the Mammals of the World. 15-26. Lynx Edicions.
  • Eizirik, E., & Murphy, W. J. (2009). Carnivores (Carnivora). Hedges, S. B., & Kumar, S. (Eds.), The Timetree of Life. 504-507. OUP Oxford.
  • Murphy, W. J., & Eizirik, E. (2009). Placental Mammals (Eutheria). Hedges, S. B., & Kumar, S. (Eds.), The Timetree of Life. 471-474. OUP Oxford.
    online source badge
  • Page, J. E., & Murphy, W. J. (2008). Construction of radiation hybrid panels.. Methods in molecular biology (Clifton, N.J.). Murphy, W. J. (Eds.), Phylogenomics. 51-64. Springer Nature.
    doi badge pubmed badge online source badge
  • Springer, M. S., Murphy, W. J., Eizirik, E., Madsen, O., Scally, M., Douady, C. J., ... O'Brien, S. J. (2007). A Molecular Classification for the Living Orders of Placental Mammals and the Phylogenetic Placement of Primates. Ravosa, M. J., & Dagosto, M. (Eds.), PRIMATE ORIGINS: Adaptations and Evolution. 1-28. Springer Nature.
    doi badge online source badge
Repository Documents / Preprints7
  • Mouton, A., Bird, D., Li, G., Craven, B. A., Levine, J. M., Morselli, M., ... Murphy, W. J. (2024). Genetic and anatomical determinants of olfaction in dogs and wild canids.
    doi badge online source badge
  • Carroll, R. A., Rice, E. S., Murphy, W. J., Lyons, L. A., Coghill, L., Swanson, W. F., ... Warren, W. C. (2022). A novel fishing cat reference genome for the evaluation of potential germline risk variants.
    doi badge online source badge
  • Foley, N. M., Mason, V. C., Harris, A. J., Bredemeyer, K. R., Damas, J., Lewin, H. A., ... Murphy, W. J. (2022). A genomic timescale for placental mammal evolution.
    doi badge online source badge
  • vonHoldt, B. M., Brzeski, K. E., Aardema, M. L., Schell, C., Rutledge, L. Y., Fain, S. R., ... Murphy, W. J. (2021). Persistence and expansion of cryptic endangered red wolf genomic ancestry along the American Gulf coast.
  • Wang, R. J., Raveendran, M., Harris, R. A., Murphy, W. J., Lyons, L. A., Rogers, J., & Hahn, M. W. (2021). De novo mutations in domestic cat are consistent with an effect of reproductive longevity on both the rate and spectrum of mutations.
    doi badge online source badge
editor of
Books1
in the news
chaired theses and dissertations
Email
wmurphy@tamu.edu
First Name
William
Last Name
Murphy
mailing address
Texas A&M University; Veterinary Integrative Biosciences; 4458 TAMU
College Station, TX 77843-4458
USA