High-Throughput Sequencing Enhanced Phage Display Identifies Peptides That Bind Mycobacteria | Academic Article individual record
abstract

Bacterial cell wall components have been previously used as infection biomarkers detectable by antibodies. However, it is possible that the surface of the Mycobacterium tuberculosis (M. tb), the causative agent of tuberculosis (TB), also possesses molecules which might be non-antigenic. This makes the probing of biomarkers on the surface of M. tb cell wall difficult using antibodies. Here we demonstrate the use of phage display technology to identify peptides that bind to mycobacteria. We identified these clones using both random clone picking and high throughput sequencing. We demonstrate that random clone picking does not necessarily identify highly enriched clones. We further showed that the clone displaying the CPLHARLPC peptide which was identified by Illumina sequencing as the most enriched, binds better to mycobacteria than three clones selected by random picking. Using surface plasmon resonance, we showed that chemically synthesised CPLHARLPC peptide binds to a 15 KDa peptide from M.tb H37Rv whole cell lysates. These observations demonstrate that phage display technology combined with high-throughput sequencing is a powerful tool to identify peptides that can be used for investigating potential non-antigenic biomarkers for TB and other bacterial infections.

author list (cited authors)
Ngubane, N., Gresh, L., Ioerger, T. R., Sacchettini, J. C., Zhang, Y. J., Rubin, E. J., Pym, A., & Khati, M.
publication date
2013
published in
PLoS ONE Journal
keywords
  • Cell WallHigh-Throughput Screening AssaysMycobacterium TuberculosisOligopeptidesPeptide LibraryProtein Binding
PubMed Central ID
24265677
identifier
49015SE
Digital Object Identifier (DOI)
start page
e77844
end page
e77844
volume
8
issue
11